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Cluster: Rep_1999_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1999_c_5 Rep_1999_c_5_56 59649 62798 + 2.A.66.4.5
CAZyme Rep_1999_c_5 Rep_1999_c_5_57 62780 63892 + GT4
pfam Rep_1999_c_5 Rep_1999_c_5_58 63892 64389 + DUF4330
pfam Rep_1999_c_5 Rep_1999_c_5_59 64391 64867 + DUF4330
CAZyme Rep_1999_c_5 Rep_1999_c_5_60 64882 67113 + GT4
CAZyme Rep_1999_c_5 Rep_1999_c_5_61 67130 67861 + GT26
TC Rep_1999_c_5 Rep_1999_c_5_62 67889 68746 + 2.A.115.1.1
TF Rep_1999_c_5 Rep_1999_c_5_63 69040 70131 + 0037176
TC Rep_1999_c_5 Rep_1999_c_5_64 70488 71174 + 3.A.1.140.1
pfam Rep_1999_c_5 Rep_1999_c_5_65 71164 72066 + FtsX | FtsX_ECD
TC Rep_1999_c_5 Rep_1999_c_5_66 72198 73376 + 9.B.174.1.1
TC Rep_1999_c_5 Rep_1999_c_5_67 73481 74539 + 9.B.157.1.2
Gene ID: Rep_1999_c_5_56
Type: TC
Location: 59649 - 62798 (+)
Gene ID: Rep_1999_c_5_57
Type: CAZyme
Location: 62780 - 63892 (+)
Gene ID: Rep_1999_c_5_58
Type: pfam
Location: 63892 - 64389 (+)
Gene ID: Rep_1999_c_5_59
Type: pfam
Location: 64391 - 64867 (+)
Gene ID: Rep_1999_c_5_60
Type: CAZyme
Location: 64882 - 67113 (+)
Gene ID: Rep_1999_c_5_61
Type: CAZyme
Location: 67130 - 67861 (+)
Gene ID: Rep_1999_c_5_62
Type: TC
Location: 67889 - 68746 (+)
Gene ID: Rep_1999_c_5_63
Type: TF
Location: 69040 - 70131 (+)
Gene ID: Rep_1999_c_5_64
Type: TC
Location: 70488 - 71174 (+)
Gene ID: Rep_1999_c_5_65
Type: pfam
Location: 71164 - 72066 (+)
Gene ID: Rep_1999_c_5_66
Type: TC
Location: 72198 - 73376 (+)
Gene ID: Rep_1999_c_5_67
Type: TC
Location: 73481 - 74539 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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