Cluster: Rep_1999_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1999
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1999_c_1 | Rep_1999_c_1_243 | 249170 | 251278 | + | GH13_39 |
| pfam | Rep_1999_c_1 | Rep_1999_c_1_244 | 251282 | 251959 | + | PseudoU_synth_2 |
| TC | Rep_1999_c_1 | Rep_1999_c_1_245 | 252105 | 254558 | + | 3.A.9.1.2 |
| NULL(UNKNOWN) | Rep_1999_c_1 | Rep_1999_c_1_246 | 254710 | 255123 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | Rep_1999_c_1 | Rep_1999_c_1_247 | 255248 | 256636 | + | S16.UNW |
| TC | Rep_1999_c_1 | Rep_1999_c_1_248 | 256776 | 260243 | + | 3.B.1.1.1 |
| TC | Rep_1999_c_1 | Rep_1999_c_1_249 | 260626 | 261297 | - | 9.B.143.2.3 |
Gene ID: Rep_1999_c_1_243
Type: CAZyme
Location: 249170 - 251278 (+)
Type: CAZyme
Location: 249170 - 251278 (+)
Gene ID: Rep_1999_c_1_244
Type: pfam
Location: 251282 - 251959 (+)
Type: pfam
Location: 251282 - 251959 (+)
Gene ID: Rep_1999_c_1_245
Type: TC
Location: 252105 - 254558 (+)
Type: TC
Location: 252105 - 254558 (+)
Gene ID: Rep_1999_c_1_246
Type:
Location: 254710 - 255123 (+)
Type:
Location: 254710 - 255123 (+)
Gene ID: Rep_1999_c_1_247
Type: peptidase
Location: 255248 - 256636 (+)
Type: peptidase
Location: 255248 - 256636 (+)
Gene ID: Rep_1999_c_1_248
Type: TC
Location: 256776 - 260243 (+)
Type: TC
Location: 256776 - 260243 (+)
Gene ID: Rep_1999_c_1_249
Type: TC
Location: 260626 - 261297 (-)
Type: TC
Location: 260626 - 261297 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Anaerotignum
Species
Anaerotignum sp902477755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.