Cluster: Rep_1994_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1994
- CGC Family ID: CGCFAM_02357
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1994_c_3 | Rep_1994_c_3_5 | 4565 | 5977 | - | 2.A.81.2.2 |
| peptidase | Rep_1994_c_3 | Rep_1994_c_3_6 | 6032 | 7672 | - | M38.UNW |
| CAZyme | Rep_1994_c_3 | Rep_1994_c_3_7 | 7696 | 8538 | - | CE4 |
| TC | Rep_1994_c_3 | Rep_1994_c_3_8 | 8548 | 9984 | - | 2.A.35.1.1 |
| pfam | Rep_1994_c_3 | Rep_1994_c_3_9 | 10045 | 10758 | - | adh_short | Epimerase | KR | adh_short_C2 |
| TC | Rep_1994_c_3 | Rep_1994_c_3_10 | 10902 | 12941 | + | 3.A.23.1.1 |
Gene ID: Rep_1994_c_3_5
Type: TC
Location: 4565 - 5977 (-)
Type: TC
Location: 4565 - 5977 (-)
Gene ID: Rep_1994_c_3_6
Type: peptidase
Location: 6032 - 7672 (-)
Type: peptidase
Location: 6032 - 7672 (-)
Gene ID: Rep_1994_c_3_7
Type: CAZyme
Location: 7696 - 8538 (-)
Type: CAZyme
Location: 7696 - 8538 (-)
Gene ID: Rep_1994_c_3_8
Type: TC
Location: 8548 - 9984 (-)
Type: TC
Location: 8548 - 9984 (-)
Gene ID: Rep_1994_c_3_9
Type: pfam
Location: 10045 - 10758 (-)
Type: pfam
Location: 10045 - 10758 (-)
Gene ID: Rep_1994_c_3_10
Type: TC
Location: 10902 - 12941 (+)
Type: TC
Location: 10902 - 12941 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Fimisoma
Species
Fimisoma sp900542295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.