Cluster: Rep_1989_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1989
- CGC Family ID: CGCFAM_01012
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1989_c_0 | Rep_1989_c_0_103 | 105703 | 108249 | + | 3.A.12.1.1 |
| pfam | Rep_1989_c_0 | Rep_1989_c_0_104 | 108252 | 109583 | + | UPF0004 | TRAM | Radical_SAM | TRAM_2 |
| TC | Rep_1989_c_0 | Rep_1989_c_0_105 | 109570 | 110100 | + | 4.F.1.1.7 |
| pfam | Rep_1989_c_0 | Rep_1989_c_0_106 | 110120 | 111355 | + | MoCF_biosynth | CinA | CinA_KH |
| pfam | Rep_1989_c_0 | Rep_1989_c_0_107 | 111464 | 112600 | + | RecA | Rad51 | RecA_C |
| CAZyme | Rep_1989_c_0 | Rep_1989_c_0_108 | 112830 | 113648 | + | CE4 |
Gene ID: Rep_1989_c_0_103
Type: TC
Location: 105703 - 108249 (+)
Type: TC
Location: 105703 - 108249 (+)
Gene ID: Rep_1989_c_0_104
Type: pfam
Location: 108252 - 109583 (+)
Type: pfam
Location: 108252 - 109583 (+)
Gene ID: Rep_1989_c_0_105
Type: TC
Location: 109570 - 110100 (+)
Type: TC
Location: 109570 - 110100 (+)
Gene ID: Rep_1989_c_0_106
Type: pfam
Location: 110120 - 111355 (+)
Type: pfam
Location: 110120 - 111355 (+)
Gene ID: Rep_1989_c_0_107
Type: pfam
Location: 111464 - 112600 (+)
Type: pfam
Location: 111464 - 112600 (+)
Gene ID: Rep_1989_c_0_108
Type: CAZyme
Location: 112830 - 113648 (+)
Type: CAZyme
Location: 112830 - 113648 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Fimisoma
Species
Fimisoma sp900754795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.