Cluster: Rep_1984_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1984
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1984_c_10 | Rep_1984_c_10_29 | 33882 | 34997 | - | GT28 |
| TC | Rep_1984_c_10 | Rep_1984_c_10_30 | 35059 | 36183 | - | 2.A.103.1.3 |
| pfam | Rep_1984_c_10 | Rep_1984_c_10_31 | 36229 | 37611 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | Rep_1984_c_10 | Rep_1984_c_10_32 | 37644 | 38642 | - | 9.B.146.1.3 |
Gene ID: Rep_1984_c_10_29
Type: CAZyme
Location: 33882 - 34997 (-)
Type: CAZyme
Location: 33882 - 34997 (-)
Gene ID: Rep_1984_c_10_30
Type: TC
Location: 35059 - 36183 (-)
Type: TC
Location: 35059 - 36183 (-)
Gene ID: Rep_1984_c_10_31
Type: pfam
Location: 36229 - 37611 (-)
Type: pfam
Location: 36229 - 37611 (-)
Gene ID: Rep_1984_c_10_32
Type: TC
Location: 37644 - 38642 (-)
Type: TC
Location: 37644 - 38642 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
CAG-238
Species
CAG-238 sp900551415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_1984_c_10_29 | vegetarian > omnivore | 1.73340 | 0.00821 |
| Rep_1984_c_10_29 | vegetarian > vegan | 2.36913 | 0.00573 |
| Rep_1984_c_10_30 | vegetarian > omnivore | 2.13535 | 0.00821 |
| Rep_1984_c_10_30 | vegetarian > vegan | 2.48510 | 0.00573 |
| Rep_1984_c_10_31 | vegetarian > omnivore | 2.74148 | 0.00821 |
| Rep_1984_c_10_31 | vegetarian > vegan | 2.13146 | 0.00573 |
| Rep_1984_c_10_32 | vegetarian > omnivore | 1.98997 | 0.00821 |
| Rep_1984_c_10_32 | vegetarian > vegan | 1.21620 | 0.00573 |