Cluster: Rep_1984_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1984
- CGC Family ID: CGCFAM_08968
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1984_c_7 | Rep_1984_c_7_13 | 14710 | 15846 | - | 2.A.86.1.8 |
| STP | Rep_1984_c_7 | Rep_1984_c_7_14 | 15916 | 16698 | - | Fer4 | Nitroreductase |
| pfam | Rep_1984_c_7 | Rep_1984_c_7_15 | 16799 | 17602 | - | Phage_integrase |
| CAZyme | Rep_1984_c_7 | Rep_1984_c_7_16 | 17735 | 18673 | - | GH18 |
Gene ID: Rep_1984_c_7_13
Type: TC
Location: 14710 - 15846 (-)
Type: TC
Location: 14710 - 15846 (-)
Gene ID: Rep_1984_c_7_14
Type: STP
Location: 15916 - 16698 (-)
Type: STP
Location: 15916 - 16698 (-)
Gene ID: Rep_1984_c_7_15
Type: pfam
Location: 16799 - 17602 (-)
Type: pfam
Location: 16799 - 17602 (-)
Gene ID: Rep_1984_c_7_16
Type: CAZyme
Location: 17735 - 18673 (-)
Type: CAZyme
Location: 17735 - 18673 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
CAG-238
Species
CAG-238 sp900551415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_1984_c_7_13 | vegetarian > vegan | 1.68793 | 0.00573 |
| Rep_1984_c_7_14 | vegetarian > omnivore | 1.84927 | 0.00821 |
| Rep_1984_c_7_14 | vegetarian > vegan | 3.64728 | 0.00573 |
| Rep_1984_c_7_15 | vegetarian > omnivore | 3.16423 | 0.00821 |
| Rep_1984_c_7_15 | vegetarian > vegan | 1.10228 | 0.00573 |