Cluster: Rep_1979_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1979
- CGC Family ID: CGCFAM_01731
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1979_c_28 | Rep_1979_c_28_12 | 13600 | 15150 | - | 2.A.15.1.11 |
| TF | Rep_1979_c_28 | Rep_1979_c_28_13 | 15459 | 16088 | + | GntR |
| CAZyme | Rep_1979_c_28 | Rep_1979_c_28_14 | 16253 | 16963 | - | GH23 |
| CAZyme | Rep_1979_c_28 | Rep_1979_c_28_15 | 17283 | 17972 | - | GH23 |
Gene ID: Rep_1979_c_28_12
Type: TC
Location: 13600 - 15150 (-)
Type: TC
Location: 13600 - 15150 (-)
Gene ID: Rep_1979_c_28_13
Type: TF
Location: 15459 - 16088 (+)
Type: TF
Location: 15459 - 16088 (+)
Gene ID: Rep_1979_c_28_14
Type: CAZyme
Location: 16253 - 16963 (-)
Type: CAZyme
Location: 16253 - 16963 (-)
Gene ID: Rep_1979_c_28_15
Type: CAZyme
Location: 17283 - 17972 (-)
Type: CAZyme
Location: 17283 - 17972 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Emergencia
Species
Emergencia sp904420065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.