Cluster: Rep_1977_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1977
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1977_c_3 | Rep_1977_c_3_20 | 21098 | 23656 | + | 3.A.3.2.21 |
| pfam | Rep_1977_c_3 | Rep_1977_c_3_21 | 23747 | 24793 | + | UDG | Lysine_decarbox | LDcluster4 |
| TF | Rep_1977_c_3 | Rep_1977_c_3_22 | 24762 | 25607 | - | MerR |
| TC | Rep_1977_c_3 | Rep_1977_c_3_23 | 25692 | 27026 | + | 2.A.66.1.37 |
| pfam | Rep_1977_c_3 | Rep_1977_c_3_24 | 27149 | 27766 | + | PRK | KAP_NTPase |
| CAZyme | Rep_1977_c_3 | Rep_1977_c_3_25 | 27786 | 28835 | + | CE4 |
Gene ID: Rep_1977_c_3_20
Type: TC
Location: 21098 - 23656 (+)
Type: TC
Location: 21098 - 23656 (+)
Gene ID: Rep_1977_c_3_21
Type: pfam
Location: 23747 - 24793 (+)
Type: pfam
Location: 23747 - 24793 (+)
Gene ID: Rep_1977_c_3_22
Type: TF
Location: 24762 - 25607 (-)
Type: TF
Location: 24762 - 25607 (-)
Gene ID: Rep_1977_c_3_23
Type: TC
Location: 25692 - 27026 (+)
Type: TC
Location: 25692 - 27026 (+)
Gene ID: Rep_1977_c_3_24
Type: pfam
Location: 27149 - 27766 (+)
Type: pfam
Location: 27149 - 27766 (+)
Gene ID: Rep_1977_c_3_25
Type: CAZyme
Location: 27786 - 28835 (+)
Type: CAZyme
Location: 27786 - 28835 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
UMGS973
Species
UMGS973 sp900547295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.