Cluster: Rep_1977_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1977
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1977_c_1 | Rep_1977_c_1_57 | 45403 | 48078 | + | 3.A.12.1.1 |
| pfam | Rep_1977_c_1 | Rep_1977_c_1_58 | 48062 | 49369 | + | UPF0004 | TRAM | Radical_SAM | TRAM_2 |
| TC | Rep_1977_c_1 | Rep_1977_c_1_59 | 49371 | 49901 | + | 4.F.1.1.7 |
| pfam | Rep_1977_c_1 | Rep_1977_c_1_60 | 49912 | 51144 | + | MoCF_biosynth | CinA | CinA_KH |
| STP | Rep_1977_c_1 | Rep_1977_c_1_61 | 51280 | 52338 | + | ATPase_2 |
| CAZyme | Rep_1977_c_1 | Rep_1977_c_1_62 | 52369 | 53214 | + | GH25 |
Gene ID: Rep_1977_c_1_57
Type: TC
Location: 45403 - 48078 (+)
Type: TC
Location: 45403 - 48078 (+)
Gene ID: Rep_1977_c_1_58
Type: pfam
Location: 48062 - 49369 (+)
Type: pfam
Location: 48062 - 49369 (+)
Gene ID: Rep_1977_c_1_59
Type: TC
Location: 49371 - 49901 (+)
Type: TC
Location: 49371 - 49901 (+)
Gene ID: Rep_1977_c_1_60
Type: pfam
Location: 49912 - 51144 (+)
Type: pfam
Location: 49912 - 51144 (+)
Gene ID: Rep_1977_c_1_61
Type: STP
Location: 51280 - 52338 (+)
Type: STP
Location: 51280 - 52338 (+)
Gene ID: Rep_1977_c_1_62
Type: CAZyme
Location: 52369 - 53214 (+)
Type: CAZyme
Location: 52369 - 53214 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
UMGS973
Species
UMGS973 sp900547295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.