dbCAN Logo

Cluster: Rep_1975_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1975_c_12 Rep_1975_c_12_24 25498 26169 + 3.A.2.1.2
pfam Rep_1975_c_12 Rep_1975_c_12_25 26333 26560 + ATP-synt_C
pfam Rep_1975_c_12 Rep_1975_c_12_26 26606 27112 + ATP-synt_B
TC Rep_1975_c_12 Rep_1975_c_12_27 27100 27633 + 3.A.2.1.5
TC Rep_1975_c_12 Rep_1975_c_12_28 27649 29169 + 3.A.2.1.5
TC Rep_1975_c_12 Rep_1975_c_12_29 29198 30115 + 3.A.2.1.5
TC Rep_1975_c_12 Rep_1975_c_12_30 30129 31523 + 3.A.2.1.5
pfam Rep_1975_c_12 Rep_1975_c_12_31 31513 31959 + ATP-synt_DE_N
CAZyme Rep_1975_c_12 Rep_1975_c_12_32 32172 33257 + GH23
Gene ID: Rep_1975_c_12_24
Type: TC
Location: 25498 - 26169 (+)
Gene ID: Rep_1975_c_12_25
Type: pfam
Location: 26333 - 26560 (+)
Gene ID: Rep_1975_c_12_26
Type: pfam
Location: 26606 - 27112 (+)
Gene ID: Rep_1975_c_12_27
Type: TC
Location: 27100 - 27633 (+)
Gene ID: Rep_1975_c_12_28
Type: TC
Location: 27649 - 29169 (+)
Gene ID: Rep_1975_c_12_29
Type: TC
Location: 29198 - 30115 (+)
Gene ID: Rep_1975_c_12_30
Type: TC
Location: 30129 - 31523 (+)
Gene ID: Rep_1975_c_12_31
Type: pfam
Location: 31513 - 31959 (+)
Gene ID: Rep_1975_c_12_32
Type: CAZyme
Location: 32172 - 33257 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List