Cluster: Rep_1975_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1975
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1975_c_6 | Rep_1975_c_6_13 | 9603 | 12332 | - | 3.A.3.2.21 |
| pfam | Rep_1975_c_6 | Rep_1975_c_6_14 | 12675 | 14174 | + | Rieske | FAD_binding_2 | DAO | FAD_binding_3 | NAD_binding_8 |
| CAZyme | Rep_1975_c_6 | Rep_1975_c_6_15 | 14209 | 15069 | - | CE4 |
| TF | Rep_1975_c_6 | Rep_1975_c_6_16 | 15187 | 15882 | - | Trans_reg_C |
| TC | Rep_1975_c_6 | Rep_1975_c_6_17 | 15906 | 17018 | - | 2.A.21.9.2 |
| pfam | Rep_1975_c_6 | Rep_1975_c_6_18 | 17047 | 17799 | - | ABC2_membrane_2 | ABC2_membrane_4 |
| TC | Rep_1975_c_6 | Rep_1975_c_6_19 | 17813 | 18547 | - | 3.A.1.131.1 |
Gene ID: Rep_1975_c_6_13
Type: TC
Location: 9603 - 12332 (-)
Type: TC
Location: 9603 - 12332 (-)
Gene ID: Rep_1975_c_6_14
Type: pfam
Location: 12675 - 14174 (+)
Type: pfam
Location: 12675 - 14174 (+)
Gene ID: Rep_1975_c_6_15
Type: CAZyme
Location: 14209 - 15069 (-)
Type: CAZyme
Location: 14209 - 15069 (-)
Gene ID: Rep_1975_c_6_16
Type: TF
Location: 15187 - 15882 (-)
Type: TF
Location: 15187 - 15882 (-)
Gene ID: Rep_1975_c_6_17
Type: TC
Location: 15906 - 17018 (-)
Type: TC
Location: 15906 - 17018 (-)
Gene ID: Rep_1975_c_6_18
Type: pfam
Location: 17047 - 17799 (-)
Type: pfam
Location: 17047 - 17799 (-)
Gene ID: Rep_1975_c_6_19
Type: TC
Location: 17813 - 18547 (-)
Type: TC
Location: 17813 - 18547 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
QAKD01
Species
QAKD01 sp003343965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.