Cluster: Rep_1974_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1974
- CGC Family ID: CGCFAM_05510
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1974_c_1 | Rep_1974_c_1_97 | 97211 | 99910 | - | 3.A.3.2.21 |
| pfam | Rep_1974_c_1 | Rep_1974_c_1_98 | 100288 | 101760 | + | Rieske | FAD_binding_2 | DAO | FAD_binding_3 | NAD_binding_8 |
| CAZyme | Rep_1974_c_1 | Rep_1974_c_1_99 | 101769 | 102623 | - | CE4 |
| TF | Rep_1974_c_1 | Rep_1974_c_1_100 | 102701 | 103402 | - | Trans_reg_C |
| TC | Rep_1974_c_1 | Rep_1974_c_1_101 | 103470 | 104603 | - | 2.A.21.9.2 |
| pfam | Rep_1974_c_1 | Rep_1974_c_1_102 | 104605 | 105357 | - | ABC2_membrane_2 | ABC2_membrane_4 |
| TC | Rep_1974_c_1 | Rep_1974_c_1_103 | 105370 | 106104 | - | 3.A.1.131.1 |
Gene ID: Rep_1974_c_1_97
Type: TC
Location: 97211 - 99910 (-)
Type: TC
Location: 97211 - 99910 (-)
Gene ID: Rep_1974_c_1_98
Type: pfam
Location: 100288 - 101760 (+)
Type: pfam
Location: 100288 - 101760 (+)
Gene ID: Rep_1974_c_1_99
Type: CAZyme
Location: 101769 - 102623 (-)
Type: CAZyme
Location: 101769 - 102623 (-)
Gene ID: Rep_1974_c_1_100
Type: TF
Location: 102701 - 103402 (-)
Type: TF
Location: 102701 - 103402 (-)
Gene ID: Rep_1974_c_1_101
Type: TC
Location: 103470 - 104603 (-)
Type: TC
Location: 103470 - 104603 (-)
Gene ID: Rep_1974_c_1_102
Type: pfam
Location: 104605 - 105357 (-)
Type: pfam
Location: 104605 - 105357 (-)
Gene ID: Rep_1974_c_1_103
Type: TC
Location: 105370 - 106104 (-)
Type: TC
Location: 105370 - 106104 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
QAKD01
Species
QAKD01 sp944386585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.