Cluster: Rep_1972_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1972
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1972_c_10 | Rep_1972_c_10_5 | 3626 | 6685 | + | GT51 |
| pfam | Rep_1972_c_10 | Rep_1972_c_10_6 | 6688 | 7548 | - | BacA |
| pfam | Rep_1972_c_10 | Rep_1972_c_10_7 | 7586 | 8647 | - | ThiI | tRNA_Me_trans | QueC | tRNA_Me_trans_C | tRNA_Me_trans_M |
| TC | Rep_1972_c_10 | Rep_1972_c_10_8 | 8750 | 9427 | + | 1.C.113.1.3 |
| pfam | Rep_1972_c_10 | Rep_1972_c_10_9 | 9433 | 10863 | - | PK | PK_C |
| peptidase | Rep_1972_c_10 | Rep_1972_c_10_10 | 11158 | 12948 | + | M24.UPB |
| TC | Rep_1972_c_10 | Rep_1972_c_10_11 | 12945 | 13700 | - | 3.A.25.1.1 |
Gene ID: Rep_1972_c_10_5
Type: CAZyme
Location: 3626 - 6685 (+)
Type: CAZyme
Location: 3626 - 6685 (+)
Gene ID: Rep_1972_c_10_6
Type: pfam
Location: 6688 - 7548 (-)
Type: pfam
Location: 6688 - 7548 (-)
Gene ID: Rep_1972_c_10_7
Type: pfam
Location: 7586 - 8647 (-)
Type: pfam
Location: 7586 - 8647 (-)
Gene ID: Rep_1972_c_10_8
Type: TC
Location: 8750 - 9427 (+)
Type: TC
Location: 8750 - 9427 (+)
Gene ID: Rep_1972_c_10_9
Type: pfam
Location: 9433 - 10863 (-)
Type: pfam
Location: 9433 - 10863 (-)
Gene ID: Rep_1972_c_10_10
Type: peptidase
Location: 11158 - 12948 (+)
Type: peptidase
Location: 11158 - 12948 (+)
Gene ID: Rep_1972_c_10_11
Type: TC
Location: 12945 - 13700 (-)
Type: TC
Location: 12945 - 13700 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Alterileibacterium
Species
Alterileibacterium sp902488835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.