Cluster: Rep_1972_CGC3
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_1972
- CGC Family ID: CGCFAM_11243
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1972_c_8 | Rep_1972_c_8_24 | 23288 | 24460 | - | GT4 |
| pfam | Rep_1972_c_8 | Rep_1972_c_8_25 | 24460 | 25740 | - | Wzy_C |
| NULL(UNKNOWN) | Rep_1972_c_8 | Rep_1972_c_8_26 | 25733 | 26590 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1972_c_8 | Rep_1972_c_8_27 | 26631 | 27710 | - | GT4 |
| pfam | Rep_1972_c_8 | Rep_1972_c_8_28 | 27729 | 28649 | - | Hexapep | Hexapep | Hexapep_2 |
| pfam | Rep_1972_c_8 | Rep_1972_c_8_29 | 28660 | 29988 | - | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | Rep_1972_c_8 | Rep_1972_c_8_30 | 30046 | 31299 | - | GT4 |
| TC | Rep_1972_c_8 | Rep_1972_c_8_31 | 31313 | 31999 | - | 9.B.18.1.3 |
| pfam | Rep_1972_c_8 | Rep_1972_c_8_32 | 31996 | 33210 | - | Aminotran_1_2 | DegT_DnrJ_EryC1 |
| TC | Rep_1972_c_8 | Rep_1972_c_8_33 | 33329 | 35212 | - | 9.B.18.2.1 |
| pfam | Rep_1972_c_8 | Rep_1972_c_8_34 | 35231 | 36178 | - | Transket_pyr | Transketolase_C | Transketolase_C_1 |
| pfam | Rep_1972_c_8 | Rep_1972_c_8_35 | 36175 | 37005 | - | Transketolase_N | DXP_synthase_N |
| TC | Rep_1972_c_8 | Rep_1972_c_8_36 | 37049 | 38452 | - | 1.A.26.1.2 |
Gene ID: Rep_1972_c_8_24
Type: CAZyme
Location: 23288 - 24460 (-)
Type: CAZyme
Location: 23288 - 24460 (-)
Gene ID: Rep_1972_c_8_25
Type: pfam
Location: 24460 - 25740 (-)
Type: pfam
Location: 24460 - 25740 (-)
Gene ID: Rep_1972_c_8_26
Type:
Location: 25733 - 26590 (-)
Type:
Location: 25733 - 26590 (-)
Gene ID: Rep_1972_c_8_27
Type: CAZyme
Location: 26631 - 27710 (-)
Type: CAZyme
Location: 26631 - 27710 (-)
Gene ID: Rep_1972_c_8_28
Type: pfam
Location: 27729 - 28649 (-)
Type: pfam
Location: 27729 - 28649 (-)
Gene ID: Rep_1972_c_8_29
Type: pfam
Location: 28660 - 29988 (-)
Type: pfam
Location: 28660 - 29988 (-)
Gene ID: Rep_1972_c_8_30
Type: CAZyme
Location: 30046 - 31299 (-)
Type: CAZyme
Location: 30046 - 31299 (-)
Gene ID: Rep_1972_c_8_31
Type: TC
Location: 31313 - 31999 (-)
Type: TC
Location: 31313 - 31999 (-)
Gene ID: Rep_1972_c_8_32
Type: pfam
Location: 31996 - 33210 (-)
Type: pfam
Location: 31996 - 33210 (-)
Gene ID: Rep_1972_c_8_33
Type: TC
Location: 33329 - 35212 (-)
Type: TC
Location: 33329 - 35212 (-)
Gene ID: Rep_1972_c_8_34
Type: pfam
Location: 35231 - 36178 (-)
Type: pfam
Location: 35231 - 36178 (-)
Gene ID: Rep_1972_c_8_35
Type: pfam
Location: 36175 - 37005 (-)
Type: pfam
Location: 36175 - 37005 (-)
Gene ID: Rep_1972_c_8_36
Type: TC
Location: 37049 - 38452 (-)
Type: TC
Location: 37049 - 38452 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Alterileibacterium
Species
Alterileibacterium sp902488835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.