Cluster: Rep_1972_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1972
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1972_c_5 | Rep_1972_c_5_4 | 3985 | 5631 | + | 2.A.35.2.1 |
| pfam | Rep_1972_c_5 | Rep_1972_c_5_5 | 5705 | 7042 | - | Transpeptidase |
| TC | Rep_1972_c_5 | Rep_1972_c_5_6 | 7046 | 8761 | - | 2.A.103.1.7 |
| pfam | Rep_1972_c_5 | Rep_1972_c_5_7 | 8765 | 10411 | - | tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2 |
| pfam | Rep_1972_c_5 | Rep_1972_c_5_8 | 10456 | 11580 | - | Glyphos_transf |
| CAZyme | Rep_1972_c_5 | Rep_1972_c_5_9 | 11577 | 13262 | - | GT2 |
Gene ID: Rep_1972_c_5_4
Type: TC
Location: 3985 - 5631 (+)
Type: TC
Location: 3985 - 5631 (+)
Gene ID: Rep_1972_c_5_5
Type: pfam
Location: 5705 - 7042 (-)
Type: pfam
Location: 5705 - 7042 (-)
Gene ID: Rep_1972_c_5_6
Type: TC
Location: 7046 - 8761 (-)
Type: TC
Location: 7046 - 8761 (-)
Gene ID: Rep_1972_c_5_7
Type: pfam
Location: 8765 - 10411 (-)
Type: pfam
Location: 8765 - 10411 (-)
Gene ID: Rep_1972_c_5_8
Type: pfam
Location: 10456 - 11580 (-)
Type: pfam
Location: 10456 - 11580 (-)
Gene ID: Rep_1972_c_5_9
Type: CAZyme
Location: 11577 - 13262 (-)
Type: CAZyme
Location: 11577 - 13262 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Alterileibacterium
Species
Alterileibacterium sp902488835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.