Cluster: Rep_1971_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1971
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1971_c_29 | Rep_1971_c_29_2 | 772 | 2454 | + | GT2 |
| pfam | Rep_1971_c_29 | Rep_1971_c_29_3 | 2454 | 3611 | + | Glyphos_transf |
| pfam | Rep_1971_c_29 | Rep_1971_c_29_4 | 3679 | 5325 | + | tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2 |
| TC | Rep_1971_c_29 | Rep_1971_c_29_5 | 5329 | 7056 | + | 2.A.103.1.7 |
| pfam | Rep_1971_c_29 | Rep_1971_c_29_6 | 7049 | 8386 | + | Transpeptidase |
| TC | Rep_1971_c_29 | Rep_1971_c_29_7 | 8668 | 10308 | - | 2.A.35.2.1 |
Gene ID: Rep_1971_c_29_2
Type: CAZyme
Location: 772 - 2454 (+)
Type: CAZyme
Location: 772 - 2454 (+)
Gene ID: Rep_1971_c_29_3
Type: pfam
Location: 2454 - 3611 (+)
Type: pfam
Location: 2454 - 3611 (+)
Gene ID: Rep_1971_c_29_4
Type: pfam
Location: 3679 - 5325 (+)
Type: pfam
Location: 3679 - 5325 (+)
Gene ID: Rep_1971_c_29_5
Type: TC
Location: 5329 - 7056 (+)
Type: TC
Location: 5329 - 7056 (+)
Gene ID: Rep_1971_c_29_6
Type: pfam
Location: 7049 - 8386 (+)
Type: pfam
Location: 7049 - 8386 (+)
Gene ID: Rep_1971_c_29_7
Type: TC
Location: 8668 - 10308 (-)
Type: TC
Location: 8668 - 10308 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Alterileibacterium
Species
Alterileibacterium massiliense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.