Cluster: Rep_1970_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1970
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1970_c_1 | Rep_1970_c_1_24 | 23457 | 24554 | - | GT28 |
| TC | Rep_1970_c_1 | Rep_1970_c_1_25 | 24627 | 25781 | - | 2.A.103.1.3 |
| pfam | Rep_1970_c_1 | Rep_1970_c_1_26 | 25794 | 27182 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | Rep_1970_c_1 | Rep_1970_c_1_27 | 27310 | 28287 | - | 9.B.146.1.6 |
Gene ID: Rep_1970_c_1_24
Type: CAZyme
Location: 23457 - 24554 (-)
Type: CAZyme
Location: 23457 - 24554 (-)
Gene ID: Rep_1970_c_1_25
Type: TC
Location: 24627 - 25781 (-)
Type: TC
Location: 24627 - 25781 (-)
Gene ID: Rep_1970_c_1_26
Type: pfam
Location: 25794 - 27182 (-)
Type: pfam
Location: 25794 - 27182 (-)
Gene ID: Rep_1970_c_1_27
Type: TC
Location: 27310 - 28287 (-)
Type: TC
Location: 27310 - 28287 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
S5-A14a
Species
S5-A14a sp028725765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.