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Cluster: Rep_1967_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1967_c_33 Rep_1967_c_33_5 2487 3839 + GH13_20
pfam Rep_1967_c_33 Rep_1967_c_33_6 3989 5140 + Aldo_ket_red | Fer4_9 | Fer4_17
sulfatase Rep_1967_c_33 Rep_1967_c_33_7 6094 7674 + S1_2
TC Rep_1967_c_33 Rep_1967_c_33_8 8001 9851 + 9.B.34.1.2
pfam Rep_1967_c_33 Rep_1967_c_33_9 10028 10957 + DUF1848
TC Rep_1967_c_33 Rep_1967_c_33_10 11941 12645 + 3.A.1.122.7
Gene ID: Rep_1967_c_33_5
Type: CAZyme
Location: 2487 - 3839 (+)
Gene ID: Rep_1967_c_33_6
Type: pfam
Location: 3989 - 5140 (+)
Gene ID: Rep_1967_c_33_7
Type: sulfatase
Location: 6094 - 7674 (+)
Gene ID: Rep_1967_c_33_8
Type: TC
Location: 8001 - 9851 (+)
Gene ID: Rep_1967_c_33_9
Type: pfam
Location: 10028 - 10957 (+)
Gene ID: Rep_1967_c_33_10
Type: TC
Location: 11941 - 12645 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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