Cluster: Rep_1956_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1956
- CGC Family ID: CGCFAM_03957
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1956_c_21 | Rep_1956_c_21_25 | 22581 | 24407 | - | 3.A.1.135.6 |
| TC | Rep_1956_c_21 | Rep_1956_c_21_26 | 24407 | 26146 | - | 3.A.1.135.7 |
| TF | Rep_1956_c_21 | Rep_1956_c_21_27 | 26143 | 26631 | - | MarR |
| pfam | Rep_1956_c_21 | Rep_1956_c_21_28 | 26785 | 27660 | - | DHDPS |
| TC | Rep_1956_c_21 | Rep_1956_c_21_29 | 27830 | 28429 | + | 3.A.1.25.2 |
| CAZyme | Rep_1956_c_21 | Rep_1956_c_21_30 | 28454 | 29581 | + | GH3 |
Gene ID: Rep_1956_c_21_25
Type: TC
Location: 22581 - 24407 (-)
Type: TC
Location: 22581 - 24407 (-)
Gene ID: Rep_1956_c_21_26
Type: TC
Location: 24407 - 26146 (-)
Type: TC
Location: 24407 - 26146 (-)
Gene ID: Rep_1956_c_21_27
Type: TF
Location: 26143 - 26631 (-)
Type: TF
Location: 26143 - 26631 (-)
Gene ID: Rep_1956_c_21_28
Type: pfam
Location: 26785 - 27660 (-)
Type: pfam
Location: 26785 - 27660 (-)
Gene ID: Rep_1956_c_21_29
Type: TC
Location: 27830 - 28429 (+)
Type: TC
Location: 27830 - 28429 (+)
Gene ID: Rep_1956_c_21_30
Type: CAZyme
Location: 28454 - 29581 (+)
Type: CAZyme
Location: 28454 - 29581 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Lentihominibacter
Species
Lentihominibacter hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.