Cluster: Rep_1956_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1956
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1956_c_7 | Rep_1956_c_7_75 | 78705 | 79814 | - | GT28 |
| TC | Rep_1956_c_7 | Rep_1956_c_7_76 | 79815 | 80969 | - | 2.A.103.1.3 |
| pfam | Rep_1956_c_7 | Rep_1956_c_7_77 | 80979 | 82358 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | Rep_1956_c_7 | Rep_1956_c_7_78 | 82386 | 83354 | - | 9.B.146.1.3 |
Gene ID: Rep_1956_c_7_75
Type: CAZyme
Location: 78705 - 79814 (-)
Type: CAZyme
Location: 78705 - 79814 (-)
Gene ID: Rep_1956_c_7_76
Type: TC
Location: 79815 - 80969 (-)
Type: TC
Location: 79815 - 80969 (-)
Gene ID: Rep_1956_c_7_77
Type: pfam
Location: 80979 - 82358 (-)
Type: pfam
Location: 80979 - 82358 (-)
Gene ID: Rep_1956_c_7_78
Type: TC
Location: 82386 - 83354 (-)
Type: TC
Location: 82386 - 83354 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Lentihominibacter
Species
Lentihominibacter hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.