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Cluster: Rep_1956_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1956_c_4 Rep_1956_c_4_50 60284 62032 - 3.D.1.5.1
TC Rep_1956_c_4 Rep_1956_c_4_51 62044 62562 - 3.D.1.5.1
pfam Rep_1956_c_4 Rep_1956_c_4_52 62730 63800 - DNA_pol3_delta | DNA_pol3_delta_C
TC Rep_1956_c_4 Rep_1956_c_4_53 63804 66161 - 3.A.11.1.1
CAZyme Rep_1956_c_4 Rep_1956_c_4_54 66335 69262 + GT51
pfam Rep_1956_c_4 Rep_1956_c_4_55 69310 69663 - SpoVAC_SpoVAEB
TC Rep_1956_c_4 Rep_1956_c_4_56 69680 70738 - 9.A.11.1.1
TC Rep_1956_c_4 Rep_1956_c_4_57 70751 71239 - 9.A.11.1.1
Gene ID: Rep_1956_c_4_50
Type: TC
Location: 60284 - 62032 (-)
Gene ID: Rep_1956_c_4_51
Type: TC
Location: 62044 - 62562 (-)
Gene ID: Rep_1956_c_4_52
Type: pfam
Location: 62730 - 63800 (-)
Gene ID: Rep_1956_c_4_53
Type: TC
Location: 63804 - 66161 (-)
Gene ID: Rep_1956_c_4_54
Type: CAZyme
Location: 66335 - 69262 (+)
Gene ID: Rep_1956_c_4_55
Type: pfam
Location: 69310 - 69663 (-)
Gene ID: Rep_1956_c_4_56
Type: TC
Location: 69680 - 70738 (-)
Gene ID: Rep_1956_c_4_57
Type: TC
Location: 70751 - 71239 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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