Cluster: Rep_1956_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1956
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1956_c_3 | Rep_1956_c_3_88 | 95765 | 96574 | - | CE4 |
| TC | Rep_1956_c_3 | Rep_1956_c_3_89 | 96636 | 99167 | - | 3.A.3.5.15 |
| pfam | Rep_1956_c_3 | Rep_1956_c_3_90 | 99181 | 99483 | - | Trns_repr_metal |
| TC | Rep_1956_c_3 | Rep_1956_c_3_91 | 99631 | 100668 | + | 2.A.98.1.4 |
| pfam | Rep_1956_c_3 | Rep_1956_c_3_92 | 100675 | 101430 | - | Exo_endo_phos |
| pfam | Rep_1956_c_3 | Rep_1956_c_3_93 | 101466 | 102392 | - | SUFBD_core |
| TC | Rep_1956_c_3 | Rep_1956_c_3_94 | 102405 | 103139 | - | 3.A.1.114.1 |
Gene ID: Rep_1956_c_3_88
Type: CAZyme
Location: 95765 - 96574 (-)
Type: CAZyme
Location: 95765 - 96574 (-)
Gene ID: Rep_1956_c_3_89
Type: TC
Location: 96636 - 99167 (-)
Type: TC
Location: 96636 - 99167 (-)
Gene ID: Rep_1956_c_3_90
Type: pfam
Location: 99181 - 99483 (-)
Type: pfam
Location: 99181 - 99483 (-)
Gene ID: Rep_1956_c_3_91
Type: TC
Location: 99631 - 100668 (+)
Type: TC
Location: 99631 - 100668 (+)
Gene ID: Rep_1956_c_3_92
Type: pfam
Location: 100675 - 101430 (-)
Type: pfam
Location: 100675 - 101430 (-)
Gene ID: Rep_1956_c_3_93
Type: pfam
Location: 101466 - 102392 (-)
Type: pfam
Location: 101466 - 102392 (-)
Gene ID: Rep_1956_c_3_94
Type: TC
Location: 102405 - 103139 (-)
Type: TC
Location: 102405 - 103139 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Lentihominibacter
Species
Lentihominibacter hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.