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Cluster: Rep_1956_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1956_c_2 Rep_1956_c_2_80 71806 72756 - GT2
sulfatase Rep_1956_c_2 Rep_1956_c_2_81 72760 73830 - S1_16
pfam Rep_1956_c_2 Rep_1956_c_2_82 73852 74214 + NusG_II
TC Rep_1956_c_2 Rep_1956_c_2_83 74260 74766 + 2.A.87.3.1
TC Rep_1956_c_2 Rep_1956_c_2_84 74869 75675 - 3.D.6.1.3
TC Rep_1956_c_2 Rep_1956_c_2_85 75688 76281 - 3.D.6.1.2
TC Rep_1956_c_2 Rep_1956_c_2_86 76281 76961 - 3.D.6.1.2
TC Rep_1956_c_2 Rep_1956_c_2_87 76961 77512 - 3.D.6.1.3
TC Rep_1956_c_2 Rep_1956_c_2_88 77502 78488 - 3.D.6.1.2
TC Rep_1956_c_2 Rep_1956_c_2_89 78481 79806 - 3.D.6.1.2
Gene ID: Rep_1956_c_2_80
Type: CAZyme
Location: 71806 - 72756 (-)
Gene ID: Rep_1956_c_2_81
Type: sulfatase
Location: 72760 - 73830 (-)
Gene ID: Rep_1956_c_2_82
Type: pfam
Location: 73852 - 74214 (+)
Gene ID: Rep_1956_c_2_83
Type: TC
Location: 74260 - 74766 (+)
Gene ID: Rep_1956_c_2_84
Type: TC
Location: 74869 - 75675 (-)
Gene ID: Rep_1956_c_2_85
Type: TC
Location: 75688 - 76281 (-)
Gene ID: Rep_1956_c_2_86
Type: TC
Location: 76281 - 76961 (-)
Gene ID: Rep_1956_c_2_87
Type: TC
Location: 76961 - 77512 (-)
Gene ID: Rep_1956_c_2_88
Type: TC
Location: 77502 - 78488 (-)
Gene ID: Rep_1956_c_2_89
Type: TC
Location: 78481 - 79806 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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