Cluster: Rep_1956_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1956
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1956_c_0 | Rep_1956_c_0_39 | 40195 | 41952 | + | 3.A.1.21.1 |
| TC | Rep_1956_c_0 | Rep_1956_c_0_40 | 41933 | 43693 | + | 3.A.1.106.9 |
| CAZyme | Rep_1956_c_0 | Rep_1956_c_0_41 | 43858 | 44934 | + | GT2 |
| pfam | Rep_1956_c_0 | Rep_1956_c_0_42 | 44931 | 45596 | + | Zn_dep_PLPC |
| TC | Rep_1956_c_0 | Rep_1956_c_0_43 | 45547 | 47838 | + | 3.A.3.23.2 |
| pfam | Rep_1956_c_0 | Rep_1956_c_0_44 | 47789 | 48340 | + | PAP2 | PAP2_3 |
| TC | Rep_1956_c_0 | Rep_1956_c_0_45 | 48370 | 49794 | + | 2.A.21.9.2 |
Gene ID: Rep_1956_c_0_39
Type: TC
Location: 40195 - 41952 (+)
Type: TC
Location: 40195 - 41952 (+)
Gene ID: Rep_1956_c_0_40
Type: TC
Location: 41933 - 43693 (+)
Type: TC
Location: 41933 - 43693 (+)
Gene ID: Rep_1956_c_0_41
Type: CAZyme
Location: 43858 - 44934 (+)
Type: CAZyme
Location: 43858 - 44934 (+)
Gene ID: Rep_1956_c_0_42
Type: pfam
Location: 44931 - 45596 (+)
Type: pfam
Location: 44931 - 45596 (+)
Gene ID: Rep_1956_c_0_43
Type: TC
Location: 45547 - 47838 (+)
Type: TC
Location: 45547 - 47838 (+)
Gene ID: Rep_1956_c_0_44
Type: pfam
Location: 47789 - 48340 (+)
Type: pfam
Location: 47789 - 48340 (+)
Gene ID: Rep_1956_c_0_45
Type: TC
Location: 48370 - 49794 (+)
Type: TC
Location: 48370 - 49794 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Lentihominibacter
Species
Lentihominibacter hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.