Cluster: Rep_1952_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1952
- CGC Family ID: CGCFAM_00313
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1952_c_37 | Rep_1952_c_37_1 | 169 | 1581 | - | 2.A.3.3.22 |
| NULL(UNKNOWN) | Rep_1952_c_37 | Rep_1952_c_37_2 | 1568 | 2299 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1952_c_37 | Rep_1952_c_37_3 | 2311 | 3903 | - | GT83 |
| CAZyme | Rep_1952_c_37 | Rep_1952_c_37_4 | 3913 | 5478 | - | GT83 |
| TC | Rep_1952_c_37 | Rep_1952_c_37_5 | 5475 | 6086 | - | 9.B.27.2.5 |
| TC | Rep_1952_c_37 | Rep_1952_c_37_6 | 6324 | 7661 | - | 2.A.26.1.1 |
Gene ID: Rep_1952_c_37_1
Type: TC
Location: 169 - 1581 (-)
Type: TC
Location: 169 - 1581 (-)
Gene ID: Rep_1952_c_37_2
Type:
Location: 1568 - 2299 (-)
Type:
Location: 1568 - 2299 (-)
Gene ID: Rep_1952_c_37_3
Type: CAZyme
Location: 2311 - 3903 (-)
Type: CAZyme
Location: 2311 - 3903 (-)
Gene ID: Rep_1952_c_37_4
Type: CAZyme
Location: 3913 - 5478 (-)
Type: CAZyme
Location: 3913 - 5478 (-)
Gene ID: Rep_1952_c_37_5
Type: TC
Location: 5475 - 6086 (-)
Type: TC
Location: 5475 - 6086 (-)
Gene ID: Rep_1952_c_37_6
Type: TC
Location: 6324 - 7661 (-)
Type: TC
Location: 6324 - 7661 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
UMGS915
Species
UMGS915 sp900546795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.