Cluster: Rep_1950_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1950
- CGC Family ID: CGCFAM_00329
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1950_c_12 | Rep_1950_c_12_6 | 7842 | 9431 | + | 2.A.66.2.14 |
| pfam | Rep_1950_c_12 | Rep_1950_c_12_7 | 9447 | 10904 | + | TP_methylase | PRA-PH | MazG | MazG |
| pfam | Rep_1950_c_12 | Rep_1950_c_12_8 | 10954 | 11235 | + | Bac_DNA_binding | HU-HIG |
| CAZyme | Rep_1950_c_12 | Rep_1950_c_12_9 | 11335 | 12492 | + | GT28 |
| pfam | Rep_1950_c_12 | Rep_1950_c_12_10 | 12559 | 13845 | + | Polysacc_deac_2 |
| TC | Rep_1950_c_12 | Rep_1950_c_12_11 | 13875 | 14642 | + | 2.A.102.3.2 |
Gene ID: Rep_1950_c_12_6
Type: TC
Location: 7842 - 9431 (+)
Type: TC
Location: 7842 - 9431 (+)
Gene ID: Rep_1950_c_12_7
Type: pfam
Location: 9447 - 10904 (+)
Type: pfam
Location: 9447 - 10904 (+)
Gene ID: Rep_1950_c_12_8
Type: pfam
Location: 10954 - 11235 (+)
Type: pfam
Location: 10954 - 11235 (+)
Gene ID: Rep_1950_c_12_9
Type: CAZyme
Location: 11335 - 12492 (+)
Type: CAZyme
Location: 11335 - 12492 (+)
Gene ID: Rep_1950_c_12_10
Type: pfam
Location: 12559 - 13845 (+)
Type: pfam
Location: 12559 - 13845 (+)
Gene ID: Rep_1950_c_12_11
Type: TC
Location: 13875 - 14642 (+)
Type: TC
Location: 13875 - 14642 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Anaeroglobus
Species
Anaeroglobus vaginalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.