Cluster: Rep_1950_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1950
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1950_c_107 | Rep_1950_c_107_3 | 1089 | 2342 | + | GT2 |
| pfam | Rep_1950_c_107 | Rep_1950_c_107_4 | 2352 | 3110 | + | SurE |
| TC | Rep_1950_c_107 | Rep_1950_c_107_5 | 3462 | 4844 | + | 2.A.25.1.4 |
| TC | Rep_1950_c_107 | Rep_1950_c_107_6 | 5331 | 6428 | - | 2.A.35.1.4 |
Gene ID: Rep_1950_c_107_3
Type: CAZyme
Location: 1089 - 2342 (+)
Type: CAZyme
Location: 1089 - 2342 (+)
Gene ID: Rep_1950_c_107_4
Type: pfam
Location: 2352 - 3110 (+)
Type: pfam
Location: 2352 - 3110 (+)
Gene ID: Rep_1950_c_107_5
Type: TC
Location: 3462 - 4844 (+)
Type: TC
Location: 3462 - 4844 (+)
Gene ID: Rep_1950_c_107_6
Type: TC
Location: 5331 - 6428 (-)
Type: TC
Location: 5331 - 6428 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Anaeroglobus
Species
Anaeroglobus vaginalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.