Cluster: Rep_1950_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1950
- CGC Family ID: CGCFAM_02245
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1950_c_91 | Rep_1950_c_91_2 | 481 | 1791 | + | 1.B.23.1.10 |
| TC | Rep_1950_c_91 | Rep_1950_c_91_3 | 2157 | 3398 | + | 1.B.23.1.10 |
| NULL(UNKNOWN) | Rep_1950_c_91 | Rep_1950_c_91_4 | 3500 | 3901 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1950_c_91 | Rep_1950_c_91_5 | 4062 | 4910 | + | CE4 |
| TC | Rep_1950_c_91 | Rep_1950_c_91_6 | 5056 | 6606 | - | 2.A.66.2.14 |
| TC | Rep_1950_c_91 | Rep_1950_c_91_7 | 6829 | 7134 | + | 2.A.38.1.1 |
Gene ID: Rep_1950_c_91_2
Type: TC
Location: 481 - 1791 (+)
Type: TC
Location: 481 - 1791 (+)
Gene ID: Rep_1950_c_91_3
Type: TC
Location: 2157 - 3398 (+)
Type: TC
Location: 2157 - 3398 (+)
Gene ID: Rep_1950_c_91_4
Type:
Location: 3500 - 3901 (+)
Type:
Location: 3500 - 3901 (+)
Gene ID: Rep_1950_c_91_5
Type: CAZyme
Location: 4062 - 4910 (+)
Type: CAZyme
Location: 4062 - 4910 (+)
Gene ID: Rep_1950_c_91_6
Type: TC
Location: 5056 - 6606 (-)
Type: TC
Location: 5056 - 6606 (-)
Gene ID: Rep_1950_c_91_7
Type: TC
Location: 6829 - 7134 (+)
Type: TC
Location: 6829 - 7134 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Anaeroglobus
Species
Anaeroglobus vaginalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.