Cluster: Rep_1940_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1940
- CGC Family ID: CGCFAM_00765
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1940_c_56 | Rep_1940_c_56_6 | 4620 | 6170 | + | 2.A.14.1.2 |
| CAZyme | Rep_1940_c_56 | Rep_1940_c_56_7 | 6665 | 8086 | + | AA4 |
| pfam | Rep_1940_c_56 | Rep_1940_c_56_8 | 8206 | 9480 | + | Lar_N | LarA_C |
| TC | Rep_1940_c_56 | Rep_1940_c_56_9 | 9746 | 10435 | + | 2.A.109.1.5 |
Gene ID: Rep_1940_c_56_6
Type: TC
Location: 4620 - 6170 (+)
Type: TC
Location: 4620 - 6170 (+)
Gene ID: Rep_1940_c_56_7
Type: CAZyme
Location: 6665 - 8086 (+)
Type: CAZyme
Location: 6665 - 8086 (+)
Gene ID: Rep_1940_c_56_8
Type: pfam
Location: 8206 - 9480 (+)
Type: pfam
Location: 8206 - 9480 (+)
Gene ID: Rep_1940_c_56_9
Type: TC
Location: 9746 - 10435 (+)
Type: TC
Location: 9746 - 10435 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp900548635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.