Cluster: Rep_1940_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1940
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1940_c_37 | Rep_1940_c_37_1 | 2 | 1069 | + | 2.A.1.3.70 |
| NULL(UNKNOWN) | Rep_1940_c_37 | Rep_1940_c_37_2 | 1088 | 1516 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1940_c_37 | Rep_1940_c_37_3 | 1591 | 2991 | + | AA4 |
| TC | Rep_1940_c_37 | Rep_1940_c_37_4 | 3022 | 4161 | - | 2.A.1.60.3 |
| TC | Rep_1940_c_37 | Rep_1940_c_37_5 | 4556 | 5380 | + | 3.A.1.24.1 |
Gene ID: Rep_1940_c_37_1
Type: TC
Location: 2 - 1069 (+)
Type: TC
Location: 2 - 1069 (+)
Gene ID: Rep_1940_c_37_2
Type:
Location: 1088 - 1516 (+)
Type:
Location: 1088 - 1516 (+)
Gene ID: Rep_1940_c_37_3
Type: CAZyme
Location: 1591 - 2991 (+)
Type: CAZyme
Location: 1591 - 2991 (+)
Gene ID: Rep_1940_c_37_4
Type: TC
Location: 3022 - 4161 (-)
Type: TC
Location: 3022 - 4161 (-)
Gene ID: Rep_1940_c_37_5
Type: TC
Location: 4556 - 5380 (+)
Type: TC
Location: 4556 - 5380 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp900548635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.