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Cluster: Rep_1940_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1940_c_32 Rep_1940_c_32_7 10693 11424 + GT26
pfam Rep_1940_c_32 Rep_1940_c_32_8 11439 12092 + PS_Dcarbxylase
pfam Rep_1940_c_32 Rep_1940_c_32_9 12089 12763 + CDP-OH_P_transf
CAZyme Rep_1940_c_32 Rep_1940_c_32_10 12782 14032 + GT2
pfam Rep_1940_c_32 Rep_1940_c_32_11 14042 14794 + SurE
pfam Rep_1940_c_32 Rep_1940_c_32_12 14806 15192 + dCMP_cyt_deam_1 | dCMP_cyt_deam_2
TC Rep_1940_c_32 Rep_1940_c_32_13 15557 16318 + 2.A.25.1.4
Gene ID: Rep_1940_c_32_7
Type: CAZyme
Location: 10693 - 11424 (+)
Gene ID: Rep_1940_c_32_8
Type: pfam
Location: 11439 - 12092 (+)
Gene ID: Rep_1940_c_32_9
Type: pfam
Location: 12089 - 12763 (+)
Gene ID: Rep_1940_c_32_10
Type: CAZyme
Location: 12782 - 14032 (+)
Gene ID: Rep_1940_c_32_11
Type: pfam
Location: 14042 - 14794 (+)
Gene ID: Rep_1940_c_32_12
Type: pfam
Location: 14806 - 15192 (+)
Gene ID: Rep_1940_c_32_13
Type: TC
Location: 15557 - 16318 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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