Cluster: Rep_1940_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1940
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1940_c_153 | Rep_1940_c_153_4 | 1811 | 2953 | + | GT28 |
| NULL(UNKNOWN) | Rep_1940_c_153 | Rep_1940_c_153_5 | 3022 | 3168 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1940_c_153 | Rep_1940_c_153_6 | 3204 | 3794 | + | 2.A.102.3.2 |
Gene ID: Rep_1940_c_153_4
Type: CAZyme
Location: 1811 - 2953 (+)
Type: CAZyme
Location: 1811 - 2953 (+)
Gene ID: Rep_1940_c_153_5
Type:
Location: 3022 - 3168 (+)
Type:
Location: 3022 - 3168 (+)
Gene ID: Rep_1940_c_153_6
Type: TC
Location: 3204 - 3794 (+)
Type: TC
Location: 3204 - 3794 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp900548635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.