Cluster: Rep_1940_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1940
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1940_c_94 | Rep_1940_c_94_1 | 3 | 530 | + | 9.B.146.1.6 |
| pfam | Rep_1940_c_94 | Rep_1940_c_94_2 | 586 | 1953 | + | Mur_ligase_C | Mur_ligase_M |
| CAZyme | Rep_1940_c_94 | Rep_1940_c_94_3 | 1986 | 3107 | + | GT28 |
Gene ID: Rep_1940_c_94_1
Type: TC
Location: 3 - 530 (+)
Type: TC
Location: 3 - 530 (+)
Gene ID: Rep_1940_c_94_2
Type: pfam
Location: 586 - 1953 (+)
Type: pfam
Location: 586 - 1953 (+)
Gene ID: Rep_1940_c_94_3
Type: CAZyme
Location: 1986 - 3107 (+)
Type: CAZyme
Location: 1986 - 3107 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp900548635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.