Cluster: Rep_1940_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1940
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1940_c_1 | Rep_1940_c_1_1 | 93 | 1517 | - | 1.B.23.1.3 |
| pfam | Rep_1940_c_1 | Rep_1940_c_1_2 | 1535 | 2314 | - | S6PP | Hydrolase_3 |
| CAZyme | Rep_1940_c_1 | Rep_1940_c_1_3 | 2308 | 3990 | - | GH13_31 |
| TC | Rep_1940_c_1 | Rep_1940_c_1_4 | 4000 | 6156 | - | 4.A.1.1.8 |
Gene ID: Rep_1940_c_1_1
Type: TC
Location: 93 - 1517 (-)
Type: TC
Location: 93 - 1517 (-)
Gene ID: Rep_1940_c_1_2
Type: pfam
Location: 1535 - 2314 (-)
Type: pfam
Location: 1535 - 2314 (-)
Gene ID: Rep_1940_c_1_3
Type: CAZyme
Location: 2308 - 3990 (-)
Type: CAZyme
Location: 2308 - 3990 (-)
Gene ID: Rep_1940_c_1_4
Type: TC
Location: 4000 - 6156 (-)
Type: TC
Location: 4000 - 6156 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp900548635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.