Cluster: Rep_1934_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1934
- CGC Family ID: CGCFAM_00329
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1934_c_59 | Rep_1934_c_59_2 | 180 | 1727 | + | 2.A.66.2.14 |
| pfam | Rep_1934_c_59 | Rep_1934_c_59_3 | 1743 | 2747 | + | PRA-PH | MazG | MazG |
| pfam | Rep_1934_c_59 | Rep_1934_c_59_4 | 2801 | 3079 | + | Bac_DNA_binding |
| CAZyme | Rep_1934_c_59 | Rep_1934_c_59_5 | 3215 | 4366 | + | GT28 |
| TC | Rep_1934_c_59 | Rep_1934_c_59_6 | 4446 | 5225 | + | 2.A.102.3.1 |
Gene ID: Rep_1934_c_59_2
Type: TC
Location: 180 - 1727 (+)
Type: TC
Location: 180 - 1727 (+)
Gene ID: Rep_1934_c_59_3
Type: pfam
Location: 1743 - 2747 (+)
Type: pfam
Location: 1743 - 2747 (+)
Gene ID: Rep_1934_c_59_4
Type: pfam
Location: 2801 - 3079 (+)
Type: pfam
Location: 2801 - 3079 (+)
Gene ID: Rep_1934_c_59_5
Type: CAZyme
Location: 3215 - 4366 (+)
Type: CAZyme
Location: 3215 - 4366 (+)
Gene ID: Rep_1934_c_59_6
Type: TC
Location: 4446 - 5225 (+)
Type: TC
Location: 4446 - 5225 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera_C
Species
Megasphaera_C lornae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.