Cluster: Rep_1934_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1934
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1934_c_18 | Rep_1934_c_18_17 | 16469 | 17605 | - | GT28 |
| pfam | Rep_1934_c_18 | Rep_1934_c_18_18 | 17637 | 18992 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | Rep_1934_c_18 | Rep_1934_c_18_19 | 19030 | 20007 | - | 9.B.146.1.6 |
Gene ID: Rep_1934_c_18_17
Type: CAZyme
Location: 16469 - 17605 (-)
Type: CAZyme
Location: 16469 - 17605 (-)
Gene ID: Rep_1934_c_18_18
Type: pfam
Location: 17637 - 18992 (-)
Type: pfam
Location: 17637 - 18992 (-)
Gene ID: Rep_1934_c_18_19
Type: TC
Location: 19030 - 20007 (-)
Type: TC
Location: 19030 - 20007 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera_C
Species
Megasphaera_C lornae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.