Cluster: Rep_1934_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1934
- CGC Family ID: CGCFAM_05863
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1934_c_9 | Rep_1934_c_9_14 | 12331 | 13170 | - | CE11 |
| pfam | Rep_1934_c_9 | Rep_1934_c_9_15 | 13338 | 14774 | - | Lyase_1 | ASL_C2 |
| pfam | Rep_1934_c_9 | Rep_1934_c_9_16 | 14796 | 16025 | - | Arginosuc_synth | Arginosuc_syn_C |
| CAZyme | Rep_1934_c_9 | Rep_1934_c_9_17 | 16202 | 16969 | + | GT51 |
| pfam | Rep_1934_c_9 | Rep_1934_c_9_18 | 17142 | 17777 | + | LUD_dom |
| TC | Rep_1934_c_9 | Rep_1934_c_9_19 | 18017 | 19534 | + | 2.A.14.1.2 |
Gene ID: Rep_1934_c_9_14
Type: CAZyme
Location: 12331 - 13170 (-)
Type: CAZyme
Location: 12331 - 13170 (-)
Gene ID: Rep_1934_c_9_15
Type: pfam
Location: 13338 - 14774 (-)
Type: pfam
Location: 13338 - 14774 (-)
Gene ID: Rep_1934_c_9_16
Type: pfam
Location: 14796 - 16025 (-)
Type: pfam
Location: 14796 - 16025 (-)
Gene ID: Rep_1934_c_9_17
Type: CAZyme
Location: 16202 - 16969 (+)
Type: CAZyme
Location: 16202 - 16969 (+)
Gene ID: Rep_1934_c_9_18
Type: pfam
Location: 17142 - 17777 (+)
Type: pfam
Location: 17142 - 17777 (+)
Gene ID: Rep_1934_c_9_19
Type: TC
Location: 18017 - 19534 (+)
Type: TC
Location: 18017 - 19534 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera_C
Species
Megasphaera_C lornae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.