Cluster: Rep_1934_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1934
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1934_c_3 | Rep_1934_c_3_3 | 3119 | 4507 | - | 2.A.25.1.4 |
| pfam | Rep_1934_c_3 | Rep_1934_c_3_4 | 4803 | 5579 | - | SurE |
| CAZyme | Rep_1934_c_3 | Rep_1934_c_3_5 | 5594 | 6841 | - | GT2 |
| pfam | Rep_1934_c_3 | Rep_1934_c_3_6 | 6861 | 7544 | - | CDP-OH_P_transf |
| pfam | Rep_1934_c_3 | Rep_1934_c_3_7 | 7541 | 8179 | - | PS_Dcarbxylase |
| CAZyme | Rep_1934_c_3 | Rep_1934_c_3_8 | 8189 | 8920 | - | GT26 |
Gene ID: Rep_1934_c_3_3
Type: TC
Location: 3119 - 4507 (-)
Type: TC
Location: 3119 - 4507 (-)
Gene ID: Rep_1934_c_3_4
Type: pfam
Location: 4803 - 5579 (-)
Type: pfam
Location: 4803 - 5579 (-)
Gene ID: Rep_1934_c_3_5
Type: CAZyme
Location: 5594 - 6841 (-)
Type: CAZyme
Location: 5594 - 6841 (-)
Gene ID: Rep_1934_c_3_6
Type: pfam
Location: 6861 - 7544 (-)
Type: pfam
Location: 6861 - 7544 (-)
Gene ID: Rep_1934_c_3_7
Type: pfam
Location: 7541 - 8179 (-)
Type: pfam
Location: 7541 - 8179 (-)
Gene ID: Rep_1934_c_3_8
Type: CAZyme
Location: 8189 - 8920 (-)
Type: CAZyme
Location: 8189 - 8920 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera_C
Species
Megasphaera_C lornae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.