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Cluster: Rep_1932_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1932_c_2 Rep_1932_c_2_41 40931 41392 + 3.A.1.14.19
pfam Rep_1932_c_2 Rep_1932_c_2_42 41518 42099 + Chromate_transp
TC Rep_1932_c_2 Rep_1932_c_2_43 42114 42686 + 2.A.51.1.6
pfam Rep_1932_c_2 Rep_1932_c_2_44 42833 43447 + Ubie_methyltran | MTS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
TC Rep_1932_c_2 Rep_1932_c_2_45 43545 45287 + 3.A.1.21.1
TC Rep_1932_c_2 Rep_1932_c_2_46 45284 47008 + 3.A.1.106.12
pfam Rep_1932_c_2 Rep_1932_c_2_47 47480 48451 + 2-Hacid_dh | 2-Hacid_dh_C | NAD_binding_2
CAZyme Rep_1932_c_2 Rep_1932_c_2_48 48500 49306 + CE4
Gene ID: Rep_1932_c_2_41
Type: TC
Location: 40931 - 41392 (+)
Gene ID: Rep_1932_c_2_42
Type: pfam
Location: 41518 - 42099 (+)
Gene ID: Rep_1932_c_2_43
Type: TC
Location: 42114 - 42686 (+)
Gene ID: Rep_1932_c_2_44
Type: pfam
Location: 42833 - 43447 (+)
Gene ID: Rep_1932_c_2_45
Type: TC
Location: 43545 - 45287 (+)
Gene ID: Rep_1932_c_2_46
Type: TC
Location: 45284 - 47008 (+)
Gene ID: Rep_1932_c_2_47
Type: pfam
Location: 47480 - 48451 (+)
Gene ID: Rep_1932_c_2_48
Type: CAZyme
Location: 48500 - 49306 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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