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Cluster: Rep_1932_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1932_c_6 Rep_1932_c_6_97 80039 81028 + 3.A.1.105.4
TC Rep_1932_c_6 Rep_1932_c_6_98 81047 82876 + 3.A.1.105.4
TC Rep_1932_c_6 Rep_1932_c_6_99 82881 84005 + 3.A.1.105.4
TC Rep_1932_c_6 Rep_1932_c_6_100 84005 85102 + 3.A.1.105.4
CAZyme Rep_1932_c_6 Rep_1932_c_6_101 85131 86198 - GH170
TC Rep_1932_c_6 Rep_1932_c_6_102 86195 87571 - 4.A.1.2.7
STP Rep_1932_c_6 Rep_1932_c_6_103 87561 88475 - SIS
TC Rep_1932_c_6 Rep_1932_c_6_104 88769 89797 + 2.A.98.1.4
Gene ID: Rep_1932_c_6_97
Type: TC
Location: 80039 - 81028 (+)
Gene ID: Rep_1932_c_6_98
Type: TC
Location: 81047 - 82876 (+)
Gene ID: Rep_1932_c_6_99
Type: TC
Location: 82881 - 84005 (+)
Gene ID: Rep_1932_c_6_100
Type: TC
Location: 84005 - 85102 (+)
Gene ID: Rep_1932_c_6_101
Type: CAZyme
Location: 85131 - 86198 (-)
Gene ID: Rep_1932_c_6_102
Type: TC
Location: 86195 - 87571 (-)
Gene ID: Rep_1932_c_6_103
Type: STP
Location: 87561 - 88475 (-)
Gene ID: Rep_1932_c_6_104
Type: TC
Location: 88769 - 89797 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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