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Cluster: Rep_191_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_191_c_49 Rep_191_c_49_8 7326 8486 - GT4
CAZyme Rep_191_c_49 Rep_191_c_49_9 8820 9935 - GT4
CAZyme Rep_191_c_49 Rep_191_c_49_10 9957 11063 - GT4
pfam Rep_191_c_49 Rep_191_c_49_11 11074 12186 - Glycos_transf_1 | Glyco_trans_1_4
NULL(UNKNOWN) Rep_191_c_49 Rep_191_c_49_12 12217 13509 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_191_c_49 Rep_191_c_49_13 13544 14422 - GT32
CAZyme Rep_191_c_49 Rep_191_c_49_14 14511 15392 - GT2
pfam Rep_191_c_49 Rep_191_c_49_15 15395 16921 - Polysacc_synt
CAZyme Rep_191_c_49 Rep_191_c_49_16 16943 17923 - GT2
TC Rep_191_c_49 Rep_191_c_49_17 17971 20391 - 8.A.3.3.4
Gene ID: Rep_191_c_49_8
Type: CAZyme
Location: 7326 - 8486 (-)
Gene ID: Rep_191_c_49_9
Type: CAZyme
Location: 8820 - 9935 (-)
Gene ID: Rep_191_c_49_10
Type: CAZyme
Location: 9957 - 11063 (-)
Gene ID: Rep_191_c_49_11
Type: pfam
Location: 11074 - 12186 (-)
Gene ID: Rep_191_c_49_12
Type:
Location: 12217 - 13509 (-)
Gene ID: Rep_191_c_49_13
Type: CAZyme
Location: 13544 - 14422 (-)
Gene ID: Rep_191_c_49_14
Type: CAZyme
Location: 14511 - 15392 (-)
Gene ID: Rep_191_c_49_15
Type: pfam
Location: 15395 - 16921 (-)
Gene ID: Rep_191_c_49_16
Type: CAZyme
Location: 16943 - 17923 (-)
Gene ID: Rep_191_c_49_17
Type: TC
Location: 17971 - 20391 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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