Cluster: Rep_191_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_191
- CGC Family ID: CGCFAM_00306
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_191_c_252 | Rep_191_c_252_6 | 6103 | 8184 | + | GH127 |
| CAZyme | Rep_191_c_252 | Rep_191_c_252_7 | 8206 | 9972 | + | GH141 |
| TC | Rep_191_c_252 | Rep_191_c_252_8 | 10170 | 11540 | + | 2.A.1.1.74 |
| CAZyme | Rep_191_c_252 | Rep_191_c_252_9 | 11524 | 13611 | + | GH78 |
| CAZyme | Rep_191_c_252 | Rep_191_c_252_10 | 13752 | 16250 | + | GH138 |
| CAZyme | Rep_191_c_252 | Rep_191_c_252_11 | 16415 | 20524 | + | CBM57 | CBM97 | GH137 | GH2 |
| CAZyme | Rep_191_c_252 | Rep_191_c_252_12 | 20695 | 23406 | + | GH2 |
Gene ID: Rep_191_c_252_6
Type: CAZyme
Location: 6103 - 8184 (+)
Type: CAZyme
Location: 6103 - 8184 (+)
Gene ID: Rep_191_c_252_7
Type: CAZyme
Location: 8206 - 9972 (+)
Type: CAZyme
Location: 8206 - 9972 (+)
Gene ID: Rep_191_c_252_8
Type: TC
Location: 10170 - 11540 (+)
Type: TC
Location: 10170 - 11540 (+)
Gene ID: Rep_191_c_252_9
Type: CAZyme
Location: 11524 - 13611 (+)
Type: CAZyme
Location: 11524 - 13611 (+)
Gene ID: Rep_191_c_252_10
Type: CAZyme
Location: 13752 - 16250 (+)
Type: CAZyme
Location: 13752 - 16250 (+)
Gene ID: Rep_191_c_252_11
Type: CAZyme
Location: 16415 - 20524 (+)
Type: CAZyme
Location: 16415 - 20524 (+)
Gene ID: Rep_191_c_252_12
Type: CAZyme
Location: 20695 - 23406 (+)
Type: CAZyme
Location: 20695 - 23406 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp944319935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_191_c_252_7 | vegetarian > vegan | 1.80668 | 0.02923 |