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Cluster: Rep_1914_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1914_c_134 Rep_1914_c_134_4 2795 4390 + 2.A.36.6.5
TC Rep_1914_c_134 Rep_1914_c_134_5 4662 6002 + 2.A.13.1.2
CAZyme Rep_1914_c_134 Rep_1914_c_134_6 6083 6970 - GT51
STP Rep_1914_c_134 Rep_1914_c_134_7 7239 9188 + HATPase_c
pfam Rep_1914_c_134 Rep_1914_c_134_8 9466 9843 + HicB_lk_antitox
TC Rep_1914_c_134 Rep_1914_c_134_9 10034 10675 + 9.B.149.1.11
TC Rep_1914_c_134 Rep_1914_c_134_10 10696 11355 + 1.A.62.3.1
Gene ID: Rep_1914_c_134_4
Type: TC
Location: 2795 - 4390 (+)
Gene ID: Rep_1914_c_134_5
Type: TC
Location: 4662 - 6002 (+)
Gene ID: Rep_1914_c_134_6
Type: CAZyme
Location: 6083 - 6970 (-)
Gene ID: Rep_1914_c_134_7
Type: STP
Location: 7239 - 9188 (+)
Gene ID: Rep_1914_c_134_8
Type: pfam
Location: 9466 - 9843 (+)
Gene ID: Rep_1914_c_134_9
Type: TC
Location: 10034 - 10675 (+)
Gene ID: Rep_1914_c_134_10
Type: TC
Location: 10696 - 11355 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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