Cluster: Rep_190_CGC28
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_190
- CGC Family ID: CGCFAM_00146
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_190_c_262 | Rep_190_c_262_1 | 93 | 1847 | - | GH35 |
| CAZyme | Rep_190_c_262 | Rep_190_c_262_2 | 1852 | 3777 | - | GH67 |
| TF | Rep_190_c_262 | Rep_190_c_262_3 | 3764 | 7798 | - | HTH_AraC |
| CAZyme | Rep_190_c_262 | Rep_190_c_262_4 | 8057 | 10606 | - | GH115 |
| TC | Rep_190_c_262 | Rep_190_c_262_5 | 10842 | 12254 | + | 2.A.2.3.2 |
| CAZyme | Rep_190_c_262 | Rep_190_c_262_6 | 12263 | 13378 | + | GH10 |
| CAZyme | Rep_190_c_262 | Rep_190_c_262_7 | 13478 | 14443 | + | GH43_1 |
Gene ID: Rep_190_c_262_1
Type: CAZyme
Location: 93 - 1847 (-)
Type: CAZyme
Location: 93 - 1847 (-)
Gene ID: Rep_190_c_262_2
Type: CAZyme
Location: 1852 - 3777 (-)
Type: CAZyme
Location: 1852 - 3777 (-)
Gene ID: Rep_190_c_262_3
Type: TF
Location: 3764 - 7798 (-)
Type: TF
Location: 3764 - 7798 (-)
Gene ID: Rep_190_c_262_4
Type: CAZyme
Location: 8057 - 10606 (-)
Type: CAZyme
Location: 8057 - 10606 (-)
Gene ID: Rep_190_c_262_5
Type: TC
Location: 10842 - 12254 (+)
Type: TC
Location: 10842 - 12254 (+)
Gene ID: Rep_190_c_262_6
Type: CAZyme
Location: 12263 - 13378 (+)
Type: CAZyme
Location: 12263 - 13378 (+)
Gene ID: Rep_190_c_262_7
Type: CAZyme
Location: 13478 - 14443 (+)
Type: CAZyme
Location: 13478 - 14443 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp937922435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.