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Cluster: Rep_190_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_190_c_237 Rep_190_c_237_2 2629 4821 - GH36
STP Rep_190_c_237 Rep_190_c_237_3 5317 6210 - PfkB
TC Rep_190_c_237 Rep_190_c_237_4 6388 7548 - 2.A.1.7.17
CAZyme Rep_190_c_237 Rep_190_c_237_5 7668 9461 - GH32
CAZyme Rep_190_c_237 Rep_190_c_237_6 9756 12200 - GH32
pfam Rep_190_c_237 Rep_190_c_237_7 12399 13583 - DUF4960
pfam Rep_190_c_237 Rep_190_c_237_8 13611 15323 - SusD_RagB | SusD-like_3
TC Rep_190_c_237 Rep_190_c_237_9 15349 18396 - 1.B.14.6.1
Gene ID: Rep_190_c_237_2
Type: CAZyme
Location: 2629 - 4821 (-)
Gene ID: Rep_190_c_237_3
Type: STP
Location: 5317 - 6210 (-)
Gene ID: Rep_190_c_237_4
Type: TC
Location: 6388 - 7548 (-)
Gene ID: Rep_190_c_237_5
Type: CAZyme
Location: 7668 - 9461 (-)
Gene ID: Rep_190_c_237_6
Type: CAZyme
Location: 9756 - 12200 (-)
Gene ID: Rep_190_c_237_7
Type: pfam
Location: 12399 - 13583 (-)
Gene ID: Rep_190_c_237_8
Type: pfam
Location: 13611 - 15323 (-)
Gene ID: Rep_190_c_237_9
Type: TC
Location: 15349 - 18396 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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