Cluster: Rep_1888_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1888
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1888_c_261 | Rep_1888_c_261_1 | 124 | 1104 | - | GT2 |
| pfam | Rep_1888_c_261 | Rep_1888_c_261_2 | 1726 | 2070 | - | rve_2 | rve_3 |
| pfam | Rep_1888_c_261 | Rep_1888_c_261_3 | 2569 | 3048 | - | dCMP_cyt_deam_1 | MafB19-deam |
| TC | Rep_1888_c_261 | Rep_1888_c_261_4 | 3162 | 3821 | - | 2.A.3.1.1 |
| TC | Rep_1888_c_261 | Rep_1888_c_261_5 | 3794 | 4384 | - | 2.A.3.1.1 |
Gene ID: Rep_1888_c_261_1
Type: CAZyme
Location: 124 - 1104 (-)
Type: CAZyme
Location: 124 - 1104 (-)
Gene ID: Rep_1888_c_261_2
Type: pfam
Location: 1726 - 2070 (-)
Type: pfam
Location: 1726 - 2070 (-)
Gene ID: Rep_1888_c_261_3
Type: pfam
Location: 2569 - 3048 (-)
Type: pfam
Location: 2569 - 3048 (-)
Gene ID: Rep_1888_c_261_4
Type: TC
Location: 3162 - 3821 (-)
Type: TC
Location: 3162 - 3821 (-)
Gene ID: Rep_1888_c_261_5
Type: TC
Location: 3794 - 4384 (-)
Type: TC
Location: 3794 - 4384 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp009929605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.