Cluster: Rep_1888_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1888
- CGC Family ID: CGCFAM_03581
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1888_c_154 | Rep_1888_c_154_2 | 857 | 2023 | + | GH3 |
| pfam | Rep_1888_c_154 | Rep_1888_c_154_3 | 2280 | 2768 | + | QueT |
| pfam | Rep_1888_c_154 | Rep_1888_c_154_4 | 2956 | 4212 | - | ELFV_dehydrog | ELFV_dehydrog_N |
| TC | Rep_1888_c_154 | Rep_1888_c_154_5 | 4616 | 4900 | - | 2.A.25.1.5 |
Gene ID: Rep_1888_c_154_2
Type: CAZyme
Location: 857 - 2023 (+)
Type: CAZyme
Location: 857 - 2023 (+)
Gene ID: Rep_1888_c_154_3
Type: pfam
Location: 2280 - 2768 (+)
Type: pfam
Location: 2280 - 2768 (+)
Gene ID: Rep_1888_c_154_4
Type: pfam
Location: 2956 - 4212 (-)
Type: pfam
Location: 2956 - 4212 (-)
Gene ID: Rep_1888_c_154_5
Type: TC
Location: 4616 - 4900 (-)
Type: TC
Location: 4616 - 4900 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp009929605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.