Cluster: Rep_1888_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1888
- CGC Family ID: CGCFAM_01745
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1888_c_110 | Rep_1888_c_110_11 | 14060 | 15694 | - | GT83 |
| TC | Rep_1888_c_110 | Rep_1888_c_110_12 | 15708 | 16310 | - | 9.B.27.2.5 |
| pfam | Rep_1888_c_110 | Rep_1888_c_110_13 | 16582 | 16803 | - | DUF2922 |
| pfam | Rep_1888_c_110 | Rep_1888_c_110_14 | 16948 | 17163 | - | DUF1659 |
| TC | Rep_1888_c_110 | Rep_1888_c_110_15 | 17332 | 18207 | - | 3.D.10.1.4 |
| pfam | Rep_1888_c_110 | Rep_1888_c_110_16 | 18207 | 19169 | - | Fer2_3 | Fer4_8 | Fer4_9 | Fer4_17 |
| TC | Rep_1888_c_110 | Rep_1888_c_110_17 | 19171 | 20889 | - | 3.D.10.1.4 |
Gene ID: Rep_1888_c_110_11
Type: CAZyme
Location: 14060 - 15694 (-)
Type: CAZyme
Location: 14060 - 15694 (-)
Gene ID: Rep_1888_c_110_12
Type: TC
Location: 15708 - 16310 (-)
Type: TC
Location: 15708 - 16310 (-)
Gene ID: Rep_1888_c_110_13
Type: pfam
Location: 16582 - 16803 (-)
Type: pfam
Location: 16582 - 16803 (-)
Gene ID: Rep_1888_c_110_14
Type: pfam
Location: 16948 - 17163 (-)
Type: pfam
Location: 16948 - 17163 (-)
Gene ID: Rep_1888_c_110_15
Type: TC
Location: 17332 - 18207 (-)
Type: TC
Location: 17332 - 18207 (-)
Gene ID: Rep_1888_c_110_16
Type: pfam
Location: 18207 - 19169 (-)
Type: pfam
Location: 18207 - 19169 (-)
Gene ID: Rep_1888_c_110_17
Type: TC
Location: 19171 - 20889 (-)
Type: TC
Location: 19171 - 20889 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp009929605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.