Cluster: Rep_1888_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1888
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1888_c_84 | Rep_1888_c_84_2 | 672 | 1820 | - | GT28 |
| pfam | Rep_1888_c_84 | Rep_1888_c_84_3 | 1820 | 3190 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | Rep_1888_c_84 | Rep_1888_c_84_4 | 3279 | 4238 | - | 9.B.146.1.6 |
Gene ID: Rep_1888_c_84_2
Type: CAZyme
Location: 672 - 1820 (-)
Type: CAZyme
Location: 672 - 1820 (-)
Gene ID: Rep_1888_c_84_3
Type: pfam
Location: 1820 - 3190 (-)
Type: pfam
Location: 1820 - 3190 (-)
Gene ID: Rep_1888_c_84_4
Type: TC
Location: 3279 - 4238 (-)
Type: TC
Location: 3279 - 4238 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp009929605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.