Cluster: Rep_1888_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1888
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1888_c_12 | Rep_1888_c_12_13 | 19316 | 21013 | + | GT83 |
| pfam | Rep_1888_c_12 | Rep_1888_c_12_14 | 21187 | 21552 | - | Ribosomal_L12 | Ribosomal_L12_N |
| pfam | Rep_1888_c_12 | Rep_1888_c_12_15 | 21623 | 22126 | - | Ribosomal_L10 |
| TC | Rep_1888_c_12 | Rep_1888_c_12_16 | 22301 | 23011 | - | 1.C.82.1.1 |
Gene ID: Rep_1888_c_12_13
Type: CAZyme
Location: 19316 - 21013 (+)
Type: CAZyme
Location: 19316 - 21013 (+)
Gene ID: Rep_1888_c_12_14
Type: pfam
Location: 21187 - 21552 (-)
Type: pfam
Location: 21187 - 21552 (-)
Gene ID: Rep_1888_c_12_15
Type: pfam
Location: 21623 - 22126 (-)
Type: pfam
Location: 21623 - 22126 (-)
Gene ID: Rep_1888_c_12_16
Type: TC
Location: 22301 - 23011 (-)
Type: TC
Location: 22301 - 23011 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp009929605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.